STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61447.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (111 aa)    
Predicted Functional Partners:
EEZ61136.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rco:RC0311 0.0010 barA; histidine kinase sensor protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.562
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.561
EEZ61450.1
Hydrolase, TatD family; KEGG: mlo:mll0418 5.6e-37 putative deoxyribonuclease K03424; Psort location: Cytoplasmic, score: 8.87.
       0.540
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.540
EEZ61449.1
Flavin reductase; Psort location: Cytoplasmic, score: 8.87.
       0.539
EEZ60429.1
Putative peptidoglycan binding domain protein; KEGG: cjk:jk2095 2.1e-09 cwlM; N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cytoplasmic, score: 8.87.
  
     0.437
EEZ62032.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.433
EEZ60415.1
Hypothetical protein; KEGG: fra:Francci3_1934 0.0082 beta-ketoacyl synthase K00647; Psort location: Cytoplasmic, score: 8.87.
 
     0.413
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.