STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61453.1Glutaredoxin; KEGG: ama:AM1083 5.3e-07 grxC1; glutaredoxin 3 K03676. (103 aa)    
Predicted Functional Partners:
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.857
EEZ61452.1
Alcohol dehydrogenase, iron-dependent; KEGG: tte:TTE0313 5.7e-81 uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family K00120; Psort location: Cytoplasmic, score: 9.98.
       0.746
EEZ62004.1
FAD dependent oxidoreductase; KEGG: ctc:CTC02436 2.6e-101 glycerol-3-phosphate dehydrogenase K00111; Psort location: Cytoplasmic, score: 8.87.
  
 0.639
EEZ60508.1
KEGG: fnu:FN2007 2.1e-51 glutathione peroxidase K00432; Belongs to the glutathione peroxidase family.
  
 0.626
EEZ61454.1
Hypothetical protein.
       0.584
EEZ61455.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.584
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
 
  
 0.507
nrdD
KEGG: cvi:CV2412 5.4e-117 nrdD; anaerobic ribonucleoside triphosphate reductase K00527; Psort location: Cytoplasmic, score: 8.87.
    
 0.507
EEZ62228.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
  0.492
rimI
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
  
 0.490
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.