STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61455.1Hypothetical protein; Psort location: Extracellular, score: 8.82. (40 aa)    
Predicted Functional Partners:
EEZ61454.1
Hypothetical protein.
       0.773
EEZ61453.1
Glutaredoxin; KEGG: ama:AM1083 5.3e-07 grxC1; glutaredoxin 3 K03676.
       0.584
EEZ61452.1
Alcohol dehydrogenase, iron-dependent; KEGG: tte:TTE0313 5.7e-81 uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family K00120; Psort location: Cytoplasmic, score: 9.98.
       0.565
EEZ61456.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.510
rsmI
S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.409
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.