STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61484.1ABC transporter, ATP-binding protein; KEGG: psb:Psyr_0356 4.4e-67 ABC transporter K02028; Psort location: CytoplasmicMembrane, score: 9.49. (256 aa)    
Predicted Functional Partners:
EEZ61486.1
KEGG: hpa:HPAG1_0922 1.2e-25 amino acid ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EEZ61487.1
ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 2.2e-24 fliY; cystine-binding periplasmic protein precursor K02030:K02424; Belongs to the bacterial solute-binding protein 3 family.
 
 0.968
EEZ62249.1
KEGG: bur:Bcep18194_A4762 1.0e-19 ABC amino acid transporter, periplasmic ligand binding protein K01713.
 
 0.889
EEZ61241.1
Efflux ABC transporter, permease protein; KEGG: rru:Rru_A3236 3.9e-50 hypothetical protein K06020; Psort location: CytoplasmicMembrane, score: 9.99.
 
      0.800
EEZ60463.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 4.9e-52 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.680
argG
KEGG: sth:STH2874 4.7e-125 argininosuccinate synthase K01940; Psort location: Cytoplasmic, score: 8.87; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.501
modB
KEGG: ava:Ava_0243 2.6e-53 molybdate ABC transporter, permease protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
     0.453
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.444
EEZ61923.1
Putative sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.435
EEZ61176.1
Transporter, SSS family; KEGG: rpr:RP465 2.1e-14 phoR; alkaline phosphatase synthesis sensor protein phoR K07636; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.435
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.