STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61492.1Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; KEGG: ece:Z2575 9.3e-184 putative oxidoreductase, major subunit K07309; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (858 aa)    
Predicted Functional Partners:
EEZ61491.1
Putative dimethylsulfoxide reductase, chain B; KEGG: ecp:ECP_0909 1.0e-58 anaerobic dimethyl sulfoxide reductase, subunit B K07307; Psort location: CytoplasmicMembrane, score: 9.49.
 
  0.937
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.911
EEZ61489.1
Cytoplasmic chaperone TorD; KEGG: vfi:VFA0083 2.7e-19 ynfI; anaerobic dimethyl sulfoxide reductase chain YnfI K00397; Psort location: Cytoplasmic, score: 8.87.
 
  0.885
EEZ61488.1
Hypothetical protein; KEGG: eci:UTI89_C0969 3.6e-24 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.839
EEZ60640.1
Cytoplasmic chaperone TorD; KEGG: vfi:VFA0083 5.4e-05 ynfI; anaerobic dimethyl sulfoxide reductase chain YnfI K00397; Psort location: Cytoplasmic, score: 8.87.
 
  0.823
EEZ60457.1
Cytoplasmic chaperone TorD; Psort location: Cytoplasmic, score: 8.87.
  
  0.819
EEZ60639.1
4Fe-4S binding domain protein; KEGG: dsy:DSY4086 4.8e-22 dmsB; putative anaerobic DMSO reductase chain B iron-sulfur subunit K00369; Psort location: Cytoplasmic, score: 9.98.
  
  0.803
EEZ61995.1
Hypothetical protein.
  
  0.767
EEZ61490.1
Putative dimethylsulfoxide reductase, chain B; KEGG: ecp:ECP_0909 3.7e-38 anaerobic dimethyl sulfoxide reductase, subunit B K07307; Psort location: Cytoplasmic, score: 9.98.
 
  0.762
EEZ61309.1
KEGG: eci:UTI89_C2483 6.5e-41 napG; ferredoxin-type protein, subunit of nitrate reductase, periplasmic K02573; Psort location: Cytoplasmic, score: 8.87.
  
  0.750
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.