STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61496.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (228 aa)    
Predicted Functional Partners:
leuS
leucine--tRNA ligase; KEGG: mta:Moth_0568 5.3e-236 leucyl-tRNA synthetase K01869; Psort location: Cytoplasmic, score: 9.98; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.695
EEZ61495.1
4Fe-4S binding domain protein; KEGG: mma:MM1824 9.8e-06 formylmethanofuran dehydrogenase K00205; Psort location: Cytoplasmic, score: 8.87.
       0.508
EEZ61498.1
Hypothetical protein; KEGG: cal:orf19.7586 1.1e-09 CHT3; chitinase 3 precursor K01183; Psort location: Extracellular, score: 9.55.
       0.437
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.