STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61554.1Iron dependent repressor DNA binding domain protein; Psort location: Cytoplasmic, score: 8.87. (142 aa)    
Predicted Functional Partners:
EEZ61551.1
Transcriptional regulator, Fur family; Psort location: Cytoplasmic, score: 8.87; Belongs to the Fur family.
  
  
 0.759
EEZ61552.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.678
thyX
Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
       0.678
EEZ61555.1
Hypothetical protein.
       0.668
EEZ61989.1
KEGG: bcz:BCZK3833 1.5e-11 transcriptional regulator, GntR family.
   
    0.510
EEZ61556.1
Hypothetical protein.
       0.509
EEZ61037.1
Transcriptional regulator, MerR family; KEGG: eci:UTI89_C3737 2.8e-08 yhdM; Zn(II)-responsive regulator of ZntA; Psort location: Cytoplasmic, score: 9.98.
  
   
 0.449
EEZ62093.1
KEGG: tte:TTE0125 1.5e-50 nuoB; NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases K00331; Psort location: Cytoplasmic, score: 8.87.
    
   0.446
EEZ61669.1
NADH ubiquinone oxidoreductase, 20 Kd subunit; KEGG: aha:AHA_2504 1.3e-76 hydrogenase-4 component I; Psort location: Cytoplasmic, score: 8.87.
    
   0.446
EEZ61604.1
Cell envelope-like function transcriptional attenuator common domain protein.
   
    0.418
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.