STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61595.1KEGG: rha:RHA1_ro08170 1.7e-19 ABC transporter, permease component; Psort location: CytoplasmicMembrane, score: 10.00. (250 aa)    
Predicted Functional Partners:
EEZ61596.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1759 1.7e-49 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit K02049; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.989
EEZ61328.1
NLPA lipoprotein.
 
 
 0.960
EEZ61963.1
KEGG: rha:RHA1_ro08170 5.0e-06 ABC transporter, permease component; Psort location: CytoplasmicMembrane, score: 9.97.
  
  
  0.845
EEZ61964.1
KEGG: aha:AHA_2937 3.9e-27 taurine ABC transporter, ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.826
EEZ61597.1
MATE efflux family protein; KEGG: pca:Pcar_2001 0.00030 vacuolar-type H+-pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
folP
Dihydropteroate synthase; KEGG: rso:RSc1527 1.6e-60 folP, RS03777; probable 7,8-dihydropteroate synthase protein K00796; Psort location: Cytoplasmic, score: 8.87.
     
 0.712
EEZ61598.1
Putative biotin--[acetyl-CoA-carboxylase] ligase; KEGG: ace:Acel_0398 2.0e-17 biotin--acetyl-CoA-carboxylase ligase K01947; Psort location: Cytoplasmic, score: 8.87.
       0.705
EEZ61962.1
Tat pathway signal sequence domain protein.
  
 
 0.656
EEZ61966.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.624
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.561
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.