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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61597.1MATE efflux family protein; KEGG: pca:Pcar_2001 0.00030 vacuolar-type H+-pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 9.99. (502 aa)    
Predicted Functional Partners:
EEZ61595.1
KEGG: rha:RHA1_ro08170 1.7e-19 ABC transporter, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
EEZ61596.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1759 1.7e-49 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit K02049; Psort location: CytoplasmicMembrane, score: 9.49.
       0.773
folP
Dihydropteroate synthase; KEGG: rso:RSc1527 1.6e-60 folP, RS03777; probable 7,8-dihydropteroate synthase protein K00796; Psort location: Cytoplasmic, score: 8.87.
     
 0.734
EEZ61598.1
Putative biotin--[acetyl-CoA-carboxylase] ligase; KEGG: ace:Acel_0398 2.0e-17 biotin--acetyl-CoA-carboxylase ligase K01947; Psort location: Cytoplasmic, score: 8.87.
  
    0.708
gap
KEGG: mta:Moth_0262 1.4e-107 glyceraldehyde-3-phosphate dehydrogenase, type I K00134; Psort location: Cytoplasmic, score: 9.98.
   
  
 0.623
rpsA
30S ribosomal protein S1; KEGG: cno:NT01CX_2096 8.4e-64 RpsA K03527; Psort location: Cytoplasmic, score: 9.98.
   
    0.604
hflB
ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.540
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.475
rplR
Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
     
 0.454
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.431
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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