STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61606.1Cell envelope-like function transcriptional attenuator common domain protein; Psort location: Cytoplasmic, score: 8.87. (429 aa)    
Predicted Functional Partners:
EEZ62156.1
Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
     0.591
EEZ61608.1
Polysaccharide deacetylase; KEGG: bce:BC3618 1.8e-31 peptidoglycan N-acetylglucosamine deacetylase K01463; Psort location: Cytoplasmic, score: 9.98.
 
     0.569
EEZ61607.1
Hypothetical protein.
       0.560
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
  
     0.497
EEZ61182.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: tfu:Tfu_3064 4.1e-71 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
  
   
 0.480
EEZ60470.1
Mur ligase middle domain protein; KEGG: sab:SAB1824c 2.1e-60 probable UDP-N-acetylmuramyl tripeptide synthase K01924; Psort location: Cytoplasmic, score: 8.87.
  
     0.456
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.433
EEZ61554.1
Iron dependent repressor DNA binding domain protein; Psort location: Cytoplasmic, score: 8.87.
   
    0.418
EEZ61334.1
Glycosyltransferase, group 4 family; KEGG: tte:TTE0154 1.4e-63 rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase K02851; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 0.405
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.