STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61641.1Transcriptional regulator, LysR family. (182 aa)    
Predicted Functional Partners:
modA
Molybdate ABC transporter, periplasmic molybdate-binding protein.
 
  
 0.739
modB
KEGG: ava:Ava_0243 2.6e-53 molybdate ABC transporter, permease protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.611
EEZ61652.1
Hypothetical protein; KEGG: bsu:BG13992 1.7e-13 pucA, yurF; xanthine dehydrogenase K00087; Psort location: Cytoplasmic, score: 8.87.
 
     0.608
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.599
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein B; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
   
 0.566
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
  
 0.514
EEZ61623.1
MOSC domain protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.502
EEZ61639.1
KEGG: cyb:CYB_0398 7.8e-61 modB; molybdate ABC transporter, permease protein K02018; Psort location: CytoplasmicMembrane, score: 9.49.
 
   
 0.491
EEZ60398.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.478
modA-2
Molybdate ABC transporter, periplasmic molybdate-binding protein.
 
  
 0.419
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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