STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menGUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (250 aa)    
Predicted Functional Partners:
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
    
 0.945
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
    
 0.935
EEZ62082.1
KEGG: fnu:FN1542 3.8e-52 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.926
EEZ61785.1
AMP-binding enzyme; KEGG: rpb:RPB_0580 6.6e-15 AMP-dependent synthetase and ligase K01897; Psort location: Cytoplasmic, score: 8.87.
    
 0.629
EEZ61646.1
Amidohydrolase family protein; KEGG: tbd:Tbd_0947 8.7e-46 chlorohydrolase/cytosine deaminase family protein K05394; Psort location: Cytoplasmic, score: 8.87.
     
 0.613
EEZ61645.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.569
EEZ60285.1
Methyltransferase domain protein; KEGG: bcz:BCZK1147 2.1e-21 SAM-dependent methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
  
  
  0.565
EEZ60927.1
4Fe-4S binding domain protein; KEGG: mst:Msp_0335 8.4e-05 porD; PorD K00168; Psort location: Cytoplasmic, score: 8.87.
     
 0.482
EEZ61644.1
TrpR family protein YerC/YecD.
       0.430
sufS
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 
 0.412
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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