STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61668.1KEGG: eci:UTI89_C3081 2.4e-18 hycH; formate hydrogenlyase maturation protein HycH; Psort location: Cytoplasmic, score: 8.87. (151 aa)    
Predicted Functional Partners:
EEZ61671.1
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; KEGG: eci:UTI89_C3084 1.0e-202 hycE; formate hydrogenlyase subunit 5 precursor; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.968
hycI
KEGG: stm:STM2845 5.8e-33 hycI; hydrogenase 3 large subunit C-terminal protease K08315; Psort location: Cytoplasmic, score: 8.87.
 
     0.958
EEZ61673.1
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; KEGG: eca:ECA1243 7.1e-51 hyfE; hydrogenase-4 component E; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.956
EEZ61669.1
NADH ubiquinone oxidoreductase, 20 Kd subunit; KEGG: aha:AHA_2504 1.3e-76 hydrogenase-4 component I; Psort location: Cytoplasmic, score: 8.87.
 
    0.932
EEZ61672.1
KEGG: rpc:RPC_4571 3.1e-137 NADH dehydrogenase (quinone) K05903; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.929
EEZ61670.1
4Fe-4S binding domain protein; KEGG: eci:UTI89_C3083 1.3e-37 hycF; formate hydrogenlyase subunit 6; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.915
EEZ61675.1
NADH-ubiquinone/plastoquinone (complex I) family protein; KEGG: rpc:RPC_4573 2.7e-147 NADH dehydrogenase (quinone) K05903; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.907
EEZ61678.1
4Fe-4S binding domain protein; KEGG: ecj:JW2466 5.3e-23 hyfA; hydrogenase 4, 4Fe-4S subunit.
 
    0.822
fnt
Formate/nitrite transporter; KEGG: shn:Shewana3_1556 2.1e-37 methionine gamma-lyase K01761; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.788
EEZ61676.1
NADH dehydrogenase; KEGG: eca:ECA1245 1.8e-70 hyfC; hydrogenase-4 component C; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.771
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.