STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61678.14Fe-4S binding domain protein; KEGG: ecj:JW2466 5.3e-23 hyfA; hydrogenase 4, 4Fe-4S subunit. (137 aa)    
Predicted Functional Partners:
EEZ61671.1
Respiratory-chain NADH dehydrogenase, 30 Kd subunit; KEGG: eci:UTI89_C3084 1.0e-202 hycE; formate hydrogenlyase subunit 5 precursor; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.978
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.967
EEZ61679.1
Formate dehydrogenase, alpha subunit; KEGG: eca:ECA1507 2.2e-246 formate dehydrogenase K00123; Psort location: Cytoplasmic, score: 8.87; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.930
EEZ61676.1
NADH dehydrogenase; KEGG: eca:ECA1245 1.8e-70 hyfC; hydrogenase-4 component C; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.921
EEZ61977.1
Hydrogenase, Fe-only; KEGG: mta:Moth_1717 3.2e-135 iron hydrogenase, small subunit K00336; Psort location: Cytoplasmic, score: 8.87.
  
 0.920
EEZ60845.1
Hydrogenase, Fe-only; KEGG: tte:TTE0894 8.1e-146 nuoG; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) K00336; Psort location: Cytoplasmic, score: 8.87.
  
 0.920
EEZ61677.1
NADH-ubiquinone/plastoquinone (complex I) family protein; KEGG: rpc:RPC_4575 3.8e-171 NADH dehydrogenase (quinone) K05903; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.881
EEZ62015.1
4Fe-4S binding domain protein; KEGG: mka:MK0307 4.3e-09 fwdF_1; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00205; Psort location: Cytoplasmic, score: 8.87.
  
 0.865
EEZ61668.1
KEGG: eci:UTI89_C3081 2.4e-18 hycH; formate hydrogenlyase maturation protein HycH; Psort location: Cytoplasmic, score: 8.87.
 
    0.822
hycI
KEGG: stm:STM2845 5.8e-33 hycI; hydrogenase 3 large subunit C-terminal protease K08315; Psort location: Cytoplasmic, score: 8.87.
 
    0.815
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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