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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61692.1Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99. (314 aa)    
Predicted Functional Partners:
EEZ60873.1
KEGG: rha:RHA1_ro08852 0.00038 protein kinase/transcriptional regulator, LuxR family K08282; Psort location: CytoplasmicMembrane, score: 9.99.
  
  0.778
EEZ61859.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.0068 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
  0.754
EEZ61109.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00043 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.746
EEZ60904.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
  0.740
EEZ61033.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00048 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.719
EEZ61702.1
KEGG: ava:Ava_B0209 0.0013 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
  0.710
EEZ60768.1
KEGG: ava:Ava_B0029 0.00084 two component transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.710
EEZ60674.1
KEGG: ava:Ava_B0029 1.4e-05 two component transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.697
EEZ60738.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00057 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.693
EEZ61157.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.0045 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.691
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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