STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61696.1Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 9.99. (396 aa)    
Predicted Functional Partners:
EEZ61356.1
Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.731
EEZ60897.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0246 family.
   
    0.606
arcC
Carbamate kinase; KEGG: tte:TTE0533 4.7e-86 arcC; Carbamate kinase K00926; Psort location: Cytoplasmic, score: 8.87.
       0.524
EEZ60909.1
Transporter, major facilitator family protein; KEGG: dre:30298 0.00037 jak2b; Janus kinase 2b K04447; Psort location: CytoplasmicMembrane, score: 9.99.
 
  
 
0.464
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.