STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61739.1Copper-exporting ATPase; KEGG: tde:TDE0008 1.5e-194 copper-translocating P-type ATPase K01533; Psort location: CytoplasmicMembrane, score: 9.99. (911 aa)    
Predicted Functional Partners:
EEZ61740.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.766
EEZ60399.1
KEGG: dvu:DVU3332 6.2e-139 heavy metal translocating P-type ATPase; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
0.698
EEZ61803.1
KEGG: dvu:DVU3332 4.2e-133 heavy metal translocating P-type ATPase; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
0.696
cadA
Cadmium-exporting ATPase; KEGG: bce:BC0596 7.6e-166 zinc-transporting ATPase K01534; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
0.676
EEZ60397.1
Heavy metal-associated domain protein; KEGG: fra:Francci3_0490 3.2e-06 heavy metal translocating P-type ATPase K01533.
   
 
 0.587
EEZ60524.1
Hypothetical protein; KEGG: fnu:FN0259 2.6e-14 zinc-transporting ATPase K01534; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.587
EEZ60548.1
Cytochrome C biogenesis protein transmembrane region; KEGG: rpa:RPA3812 7.7e-38 putative holocytochrome c synthase K06196; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.552
EEZ61970.1
Cation diffusion facilitator family transporter; KEGG: mja:MJ0449 4.3e-37 cation efflux system protein K01529; Psort location: CytoplasmicMembrane, score: 7.63; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
 0.511
topA
DNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]
 
   
 0.507
EEZ62287.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
   0.502
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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