STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61740.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (108 aa)    
Predicted Functional Partners:
EEZ61739.1
Copper-exporting ATPase; KEGG: tde:TDE0008 1.5e-194 copper-translocating P-type ATPase K01533; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.766
EEZ61741.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.603
EEZ61742.1
NlpC/P60 family protein; KEGG: fal:FRAAL3727 3.8e-09 putative magnesium-chelatase subunit K03404:K03405; Psort location: Cellwall, score: 9.17.
       0.434
pheT
KEGG: pca:Pcar_1423 1.4e-155 phenylalanyl-tRNA synthetase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.98.
      
 0.422
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.