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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61744.1LPXTG-motif cell wall anchor domain protein; Psort location: Extracellular, score: 8.82. (1371 aa)    
Predicted Functional Partners:
EEZ61028.1
LPXTG-motif cell wall anchor domain protein; KEGG: chu:CHU_2852 0.0063 CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein K01238.
  
  
  0.749
EEZ62153.1
FtsK/SpoIIIE family protein; KEGG: reh:H16_A1582 1.4e-107 DNA segregation ATPase FtsK/SpoIIIE related protein; Psort location: CytoplasmicMembrane, score: 9.99.
    
 
 0.682
EEZ61025.1
Sortase family protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.681
EEZ61026.1
Sortase family protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.666
EEZ60675.1
LPXTG-motif cell wall anchor domain protein; KEGG: eci:UTI89_C1627 4.4e-10 entS; EntS/YbdA MFS transporter; Psort location: Cellwall, score: 9.93.
 
 0.617
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.574
EEZ61342.1
Sigma-70 region 2; KEGG: reh:H16_A1096 0.00059 rpoE3; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily.
    
  0.571
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.565
EEZ62083.1
LPXTG-motif cell wall anchor domain protein; KEGG: oih:OB2932 5.8e-98 truncated lactocepin precursor K01361; Psort location: Cellwall, score: 9.17.
   
 0.549
EEZ61743.1
Site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
       0.533
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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