STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lepB-2KEGG: sth:STH2445 5.8e-17 signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S26 family. (188 aa)    
Predicted Functional Partners:
EEZ61030.1
Hypothetical protein; KEGG: hma:rrnAC3152 0.00076 atpG; vacuolar (H+)-ATPase G subunit K02121; Psort location: Cytoplasmic, score: 8.87.
       0.773
lepB
Signal peptidase I; KEGG: rxy:Rxyl_0250 3.8e-29 peptidase S26A, signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
0.610
EEZ61028.1
LPXTG-motif cell wall anchor domain protein; KEGG: chu:CHU_2852 0.0063 CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein K01238.
       0.520
EEZ61026.1
Sortase family protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.486
EEZ61025.1
Sortase family protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.482
EEZ61031.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.458
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
  
 0.450
EEZ61032.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.447
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.