STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61031.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (598 aa)    
Predicted Functional Partners:
EEZ61032.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.752
EEZ61821.1
Putative phage tail component domain protein; KEGG: pen:PSEEN1359 3.1e-41 gacS; GacS sensor kinase protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.615
EEZ61234.1
Histidine kinase; KEGG: bsu:BG12215 4.7e-14 yfiJ; two-component sensor histidine kinase. potential cognate response regulator is YfiK K02480; Psort location: CytoplasmicMembrane, score: 9.99.
   
  0.544
EEZ61399.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.498
lepB-2
KEGG: sth:STH2445 5.8e-17 signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S26 family.
       0.458
EEZ61030.1
Hypothetical protein; KEGG: hma:rrnAC3152 0.00076 atpG; vacuolar (H+)-ATPase G subunit K02121; Psort location: Cytoplasmic, score: 8.87.
       0.458
EEZ60282.1
GroES-like protein; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate.
  
     0.414
EEZ61136.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: rco:RC0311 0.0010 barA; histidine kinase sensor protein; Psort location: Cytoplasmic, score: 8.87.
   
 0.410
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.