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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61056.1KEGG: bcz:BCZK3497 1.0e-10 adaA; transcriptional regulator, AraC family K00567; Psort location: Cytoplasmic, score: 9.98. (319 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
     
 0.863
EEZ61057.1
Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.784
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.691
EEZ61058.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 7.63.
 
     0.666
EEZ61061.1
KEGG: rru:Rru_A0882 1.5e-64 ABC transporter, transmembrane region K06021; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.617
EEZ61060.1
KEGG: rru:Rru_A0864 3.9e-75 ABC transporter, transmembrane region K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.614
EEZ61059.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL4449 1.1e-40 putative dipeptide/oligopeptide transport protein (ABC superfamily, atp_bind); Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.599
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
     
 0.428
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.426
EEZ60842.1
Transcriptional regulator, AraC family; KEGG: ccr:CC2357 3.3e-39 beta-xylosidase K01198; Psort location: Cytoplasmic, score: 9.98.
  
  
 
0.421
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.