STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61070.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (297 aa)    
Predicted Functional Partners:
EEZ61071.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.822
EEZ61069.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tte:TTE0871 1.2e-64 Regulator of cell autolysis K07704; Psort location: Cytoplasmic, score: 8.87.
       0.791
pheT
KEGG: pca:Pcar_1423 1.4e-155 phenylalanyl-tRNA synthetase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.98.
     
 0.499
EEZ60368.1
Trypsin; KEGG: blo:BL0555 4.2e-62 degP; possible DO serine protease; Psort location: Cytoplasmic, score: 8.87.
    
 
 0.460
EEZ61072.1
Hypothetical protein.
       0.455
EEZ61068.1
Response regulator receiver domain protein; KEGG: rru:Rru_A0376 1.2e-30 transcriptional regulator, LytR/AlgR family K07705; Psort location: Cytoplasmic, score: 9.98.
       0.454
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.