STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61083.1PspC domain protein; Psort location: CytoplasmicMembrane, score: 9.99. (254 aa)    
Predicted Functional Partners:
EEZ60383.1
Hypothetical protein; KEGG: mst:Msp_0080 0.0071 predicted glycosyltransferase K01001; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.710
EEZ61084.1
Hypothetical protein; KEGG: hpa:HPAG1_1423 3.1e-50 putative integral membrane protein with a TlyC-like hemolysin domain K00088; Psort location: CytoplasmicMembrane, score: 9.26.
       0.652
EEZ61234.1
Histidine kinase; KEGG: bsu:BG12215 4.7e-14 yfiJ; two-component sensor histidine kinase. potential cognate response regulator is YfiK K02480; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.595
EEZ62080.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00091 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.26.
  
    0.557
EEZ61085.1
Channel protein, hemolysin III family; Psort location: CytoplasmicMembrane, score: 9.99.
       0.534
EEZ60368.1
Trypsin; KEGG: blo:BL0555 4.2e-62 degP; possible DO serine protease; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.504
EEZ61494.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 1.2e-05 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.473
EEZ61082.1
Hypothetical protein.
       0.468
EEZ60408.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00021 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.450
EEZ60528.1
KEGG: ava:Ava_B0209 0.00085 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.446
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.