STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61086.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (623 aa)    
Predicted Functional Partners:
EEZ61087.1
Hypothetical protein.
 
  
 0.979
EEZ61085.1
Channel protein, hemolysin III family; Psort location: CytoplasmicMembrane, score: 9.99.
       0.624
EEZ60947.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 4.3e-05 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.622
EEZ60738.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00057 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.618
EEZ61859.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.0068 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.604
EEZ61702.1
KEGG: ava:Ava_B0209 0.0013 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.553
EEZ60979.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.543
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
       0.538
EEZ61084.1
Hypothetical protein; KEGG: hpa:HPAG1_1423 3.1e-50 putative integral membrane protein with a TlyC-like hemolysin domain K00088; Psort location: CytoplasmicMembrane, score: 9.26.
       0.528
EEZ61089.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.517
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.