STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydBKEGG: ade:Adeh_3731 2.3e-68 cytochrome d ubiquinol oxidase, subunit II K00426; Psort location: CytoplasmicMembrane, score: 10.00. (354 aa)    
Predicted Functional Partners:
EEZ61095.1
Gram-positive signal peptide protein, YSIRK family; KEGG: rba:RB9892 1.7e-90 cydA; cytochrome oxidase chain I K00425; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
cydD
Thiol reductant ABC exporter, CydD subunit; KEGG: bur:Bcep18194_B1962 5.6e-99 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.917
EEZ61191.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1962 1.9e-72 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.677
EEZ60569.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1962 2.3e-67 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.677
EEZ61196.1
KEGG: mth:MTH1850 2.9e-31 fumarate reductase iron-sulfur protein K00245; Psort location: Cytoplasmic, score: 9.36; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
     
 0.608
EEZ61093.1
Hypothetical protein.
       0.532
EEZ61096.1
Hypothetical protein.
       0.500
EEZ61097.1
KEGG: cpr:CPR_2431 1.2e-27 nagB; glucosamine-6-phosphate isomerase K02564; Psort location: Cytoplasmic, score: 8.87.
       0.461
EEZ61098.1
HAD hydrolase, family IA, variant 1; KEGG: bfr:BF0877 2.8e-33 phosphoglycolate phosphatase K01091; Psort location: Cytoplasmic, score: 8.87.
  
   0.405
EEZ60491.1
FAD binding domain protein; KEGG: mbu:Mbur_2437 7.7e-44 protein of unknown function DUF224 K08263; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.400
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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