STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61150.1Aminotransferase, class I/II; KEGG: bsu:BG10205 1.5e-73 patA, uat; aminotransferase K00841; Psort location: Cytoplasmic, score: 8.87. (398 aa)    
Predicted Functional Partners:
EEZ62054.1
Prephenate dehydratase; KEGG: mxa:MXAN_3221 3.7e-47 pheA; chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.959
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.943
EEZ61149.1
KEGG: mta:Moth_1122 3.6e-111 citrate (Si)-synthase K01647; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.906
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 
 0.852
EEZ62004.1
FAD dependent oxidoreductase; KEGG: ctc:CTC02436 2.6e-101 glycerol-3-phosphate dehydrogenase K00111; Psort location: Cytoplasmic, score: 8.87.
  
 0.752
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
 
 0.713
EEZ60491.1
FAD binding domain protein; KEGG: mbu:Mbur_2437 7.7e-44 protein of unknown function DUF224 K08263; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.685
EEZ60769.1
KEGG: lla:L137630 4.3e-108 frdC; fumarate reductase flavoprotein subunit K00244; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
 0.683
accB
acetyl-CoA carboxylase, biotin carboxyl carrier protein; KEGG: chy:CHY_1999 6.1e-164 oadA; oxaloacetate decarboxylase, alpha subunit K01571; Psort location: Cytoplasmic, score: 8.87.
    
 0.682
EEZ62255.1
Amino acid kinase family; KEGG: cno:NT01CX_0187 1.1e-107 aspartate kinase, putative K00928; Psort location: Cytoplasmic, score: 8.87; Belongs to the aspartokinase family.
 
 
 0.677
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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