STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEUDP-glucose 4-epimerase; KEGG: yps:YPTB1171 6.7e-103 galE, galD; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 8.87; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (351 aa)    
Predicted Functional Partners:
glf
KEGG: lsl:LSL_1548 1.1e-125 glf; UDP-galactopyranose mutase K01854; Psort location: Cytoplasmic, score: 8.87.
    
 0.952
EEZ61437.1
Nucleotidyl transferase; KEGG: cpf:CPF_0487 1.9e-59 galU; UTP-glucose-1-phosphate uridylyltransferase K00963; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.945
EEZ60802.1
Glycosyltransferase, group 2 family protein; KEGG: sty:STY4088 8.2e-22 putative glycosyltransferase; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.598
EEZ61169.1
Putative dGTPase; KEGG: pcu:pc0465 3.6e-56 dgt; putative deoxyguanosinetriphosphate triphosphohydrolase (dGTPase) K01129; Psort location: Cytoplasmic, score: 8.87.
       0.518
EEZ61071.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
 0.470
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
  
 0.436
sufS
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 
  0.426
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.