STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (338 aa)    
Predicted Functional Partners:
EEZ62216.1
Putative heme d1 biosynthesis radical SAM protein NirJ1; KEGG: mbo:Mb3756 4.2e-10 possible transferase; Psort location: Cytoplasmic, score: 8.87.
    
 0.873
EEZ62214.1
Putative heme d1 biosynthesis radical SAM protein NirJ2; KEGG: tel:tlr0226 0.00024 pyruvate formate lyase activating enzyme K04069; Psort location: Cytoplasmic, score: 8.87.
    
 0.871
EEZ61618.1
Ferritin-like protein; Iron-storage protein.
     
 0.656
cobA
KEGG: mta:Moth_1248 3.1e-114 uroporphyrin-III C-methyltransferase K02302:K01719; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.595
EEZ61186.1
Kinase domain protein; KEGG: lxx:Lxx00210 1.4e-35 pknB; serine/threonine kinase K08884; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.593
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.569
EEZ61194.1
Periplasmic binding protein; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.548
EEZ60928.1
Periplasmic binding protein.
   
  
 0.468
EEZ60756.1
Periplasmic binding protein.
   
  
 0.468
EEZ60823.1
Periplasmic binding protein; Psort location: Cytoplasmic, score: 8.87.
   
  
 0.468
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.