STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61192.1ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1962 5.0e-67 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; Psort location: CytoplasmicMembrane, score: 10.00. (582 aa)    
Predicted Functional Partners:
EEZ61191.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1962 1.9e-72 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 
0.858
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 0.672
EEZ61785.1
AMP-binding enzyme; KEGG: rpb:RPB_0580 6.6e-15 AMP-dependent synthetase and ligase K01897; Psort location: Cytoplasmic, score: 8.87.
  
 0.666
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 0.655
EEZ61194.1
Periplasmic binding protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.551
EEZ61195.1
KEGG: pac:PPA0335 2.0e-48 ABC-type transporter, ATPase component K02013; Psort location: CytoplasmicMembrane, score: 9.49.
 
    
0.522
EEZ61193.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: sco:SCO3547 0.0016 SCH5.10c; putative pyrophosphate synthase K01507; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.477
cytX
KEGG: eci:UTI89_C1400 1.3e-05 ychM; putative sulfate transporter YchM K03321; Psort location: CytoplasmicMembrane, score: 10.00.
       0.476
EEZ61279.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
 0.471
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.403
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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