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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrDYjeF domain protein; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. (328 aa)    
Predicted Functional Partners:
EEZ61734.1
Hydrolase, NUDIX family; KEGG: bha:BH1524 6.7e-13 ADP-ribose pyrophosphatase, putative K01515; Psort location: Cytoplasmic, score: 8.87.
  
 0.996
EEZ60388.1
DEAD/DEAH box helicase; KEGG: cff:CFF8240_0791 3.3e-94 putative ATP-dependent RNA helicase RhlE K01529; Psort location: Cytoplasmic, score: 8.87; Belongs to the DEAD box helicase family.
  
 0.992
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
  
 0.879
acpS
Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
       0.829
EEZ60448.1
Hydrolase, P-loop family; KEGG: cjk:jk1734 2.8e-11 alr; hypothetical protein K01775; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.777
EEZ61216.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.775
ligA
DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
       0.737
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
   0.689
EEZ61211.1
Hypothetical protein; KEGG: lsa:LSA0137 1.7e-65 putative DNA helicase, superfamily I K01529; Psort location: Cytoplasmic, score: 8.87.
       0.616
EEZ61210.1
Transcriptional regulator, Rrf2 family; KEGG: ama:AM656 6.4e-11 aminotransferase, class V K04487; Psort location: Cytoplasmic, score: 8.87.
  
    0.610
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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