STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ61229.1PIN domain protein; Psort location: Cytoplasmic, score: 8.87. (135 aa)    
Predicted Functional Partners:
EEZ61230.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.800
EEZ61702.1
KEGG: ava:Ava_B0209 0.0013 two component transcriptional regulator, LuxR family K02479; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.609
EEZ61231.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.563
EEZ61232.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.563
EEZ62015.1
4Fe-4S binding domain protein; KEGG: mka:MK0307 4.3e-09 fwdF_1; probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing K00205; Psort location: Cytoplasmic, score: 8.87.
  
     0.518
EEZ61692.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.472
EEZ61234.1
Histidine kinase; KEGG: bsu:BG12215 4.7e-14 yfiJ; two-component sensor histidine kinase. potential cognate response regulator is YfiK K02480; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.454
EEZ61022.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.445
EEZ61233.1
KEGG: bur:Bcep18194_A4734 1.2e-41 nodI; nodulation ABC transporter, ATPase subunit NodI K01990; Psort location: CytoplasmicMembrane, score: 9.49.
       0.430
EEZ61235.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 9.1e-35 two component transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score: 9.98.
 
     0.415
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.