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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60955.1KEGG: reh:H16_B1845 1.5e-43 uracil-dna glycosylase K01249. (232 aa)    
Predicted Functional Partners:
rimI
Ribosomal-protein-alanine acetyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
    0.675
EEZ60954.1
Ppx/GppA phosphatase family protein; KEGG: ssp:SSP0434 8.6e-27 exopolyphosphatase K01514; Psort location: Cytoplasmic, score: 8.87.
  
    0.649
EEZ60956.1
Multidrug resistance protein, SMR family; Psort location: CytoplasmicMembrane, score: 10.00.
       0.625
EEZ60958.1
Multidrug resistance protein, SMR family; Psort location: CytoplasmicMembrane, score: 10.00.
       0.625
accB
acetyl-CoA carboxylase, biotin carboxyl carrier protein; KEGG: chy:CHY_1999 6.1e-164 oadA; oxaloacetate decarboxylase, alpha subunit K01571; Psort location: Cytoplasmic, score: 8.87.
  
    0.501
EEZ60957.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.471
EEZ60959.1
Hypothetical protein; KEGG: mfl:Mfl240 0.0023 S-adenosylmethionine synthetase K00789; Belongs to the UPF0145 family.
       0.471
EEZ61106.1
Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
   0.450
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.