STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60964.1Conserved hypothetical protein TIGR02185; Psort location: CytoplasmicMembrane, score: 9.99. (215 aa)    
Predicted Functional Partners:
EEZ60963.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.933
EEZ60962.1
KEGG: fal:FRAAL3863 9.9e-38 putative ABC transport protein, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.897
EEZ60540.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.771
EEZ60917.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.726
EEZ60960.1
ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2339 1.3e-106 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.716
EEZ62235.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.707
EEZ61300.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.681
EEZ60961.1
KEGG: pen:PSEEN2498 4.9e-91 ABC transporter, permease/ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.680
EEZ61001.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.610
EEZ61835.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.598
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.