STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60991.1Transcriptional regulator, PadR family; Psort location: Cytoplasmic, score: 8.87. (107 aa)    
Predicted Functional Partners:
EEZ60992.1
Hypothetical protein.
 
     0.947
ilvA
KEGG: fnu:FN1411 1.3e-113 threonine dehydratase K01754; Psort location: Cytoplasmic, score: 8.87.
    
  0.606
EEZ60990.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.550
EEZ60988.1
KEGG: mba:Mbar_A0297 9.7e-47 ABC transporter, ATP-binding protein K02013; Psort location: Cytoplasmic, score: 8.87.
       0.501
EEZ60989.1
Putative endoribonuclease L-PSP; KEGG: ape:APE_1501.1 1.2e-16 ribonuclease UK114.
       0.501
EEZ61310.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.450
EEZ61236.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.443
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.