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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60938.1Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87. (235 aa)    
Predicted Functional Partners:
EEZ60578.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.750
EEZ61119.1
Hypothetical protein; KEGG: sco:SCO1554 2.9e-13 SCL11.10c; putative nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K04719; Psort location: Cellwall, score: 8.93.
  
     0.688
EEZ61831.1
Putative membrane protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.669
EEZ60738.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00057 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.665
EEZ61112.1
FMN-binding domain protein; KEGG: lac:LBA1411 0.0011 fumarate reductase flavoprotein subunit K00238.
  
     0.651
EEZ61976.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.646
EEZ61584.1
FMN-binding domain protein; KEGG: ctc:CTC01847 1.0e-07 fumarate reductase flavoprotein subunit K00244.
  
     0.627
EEZ61113.1
Tat pathway signal sequence domain protein; KEGG: son:SO0970 2.0e-22 fumarate reductase flavoprotein subunit precursor K00244; Psort location: Cytoplasmic, score: 8.87.
  
     0.610
EEZ62017.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.586
EEZ61274.1
Putative Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: hac:Hac_0746 2.1e-12 hyaC; Ni/Fe hydrogenase cytochrome b subunit K00122; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.553
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.