STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60912.1Amino acid permease; KEGG: eci:UTI89_C0120 3.7e-08 aroP; aromatic amino acid transport protein AroP K03293; Psort location: CytoplasmicMembrane, score: 10.00. (477 aa)    
Predicted Functional Partners:
EEZ60913.1
Amidinotransferase; KEGG: bld:BLi04163 8.0e-75 arginine deiminase K01478; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.794
EEZ60914.1
KEGG: lmf:LMOf2365_0045 8.7e-62 argF-1; ornithine carbamoyltransferase K00611; Psort location: Cytoplasmic, score: 9.98; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
  
 0.488
EEZ62054.1
Prephenate dehydratase; KEGG: mxa:MXAN_3221 3.7e-47 pheA; chorismate mutase/prephenate dehydratase K01850; Psort location: Cytoplasmic, score: 9.98.
   
 0.463
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
   
 0.459
EEZ60911.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.445
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.