STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60919.1LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 7.0e-07 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 8.87; Belongs to the LysR transcriptional regulatory family. (295 aa)    
Predicted Functional Partners:
EEZ60918.1
Hypothetical protein; KEGG: pae:PA2862 1.9e-20 lip; lactonizing lipase precursor K01046; Psort location: Extracellular, score: 8.21.
       0.773
EEZ60917.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.648
EEZ60804.1
Transcriptional regulator, LysR family; Psort location: Cytoplasmic, score: 8.87; Belongs to the LysR transcriptional regulatory family.
  
     0.613
EEZ60599.1
KEGG: shn:Shewana3_3435 7.7e-22 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.492
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
     
 0.427
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.