STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60929.1Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: nwi:Nwi_1747 0.0019 hppA; membrane-bound proton-translocating pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (370 aa)    
Predicted Functional Partners:
EEZ60930.1
ABC transporter, ATP-binding protein; KEGG: afu:AF0430 1.1e-54 hemV-1; iron complex transport system ATP-binding protein K02013; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.981
EEZ60928.1
Periplasmic binding protein.
 
 0.942
EEZ60821.1
ABC transporter, ATP-binding protein; KEGG: mta:Moth_1464 1.2e-55 ABC transporter related K02013; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.918
EEZ61195.1
KEGG: pac:PPA0335 2.0e-48 ABC-type transporter, ATPase component K02013; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.914
EEZ60823.1
Periplasmic binding protein; Psort location: Cytoplasmic, score: 8.87.
 
 0.865
EEZ60757.1
ABC transporter, ATP-binding protein; KEGG: cac:CAC1989 5.2e-71 ABC-type iron (III) transport system, ATPase component K02013; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.811
EEZ60389.1
Tat pathway signal sequence domain protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.803
EEZ60391.1
KEGG: mba:Mbar_A0509 7.5e-56 iron compounds ABC transporter, ATP-binding protein K02013; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.797
EEZ60756.1
Periplasmic binding protein.
  
 0.764
EEZ60931.1
Methyltransferase domain protein; KEGG: hma:rrnAC3101 1.6e-10 methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
       0.757
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.