STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60667.1KEGG: ppr:PBPRA0481 8.2e-05 hypothetical transcriptional regulator, MarR family K03828; Psort location: Cytoplasmic, score: 8.87. (197 aa)    
Predicted Functional Partners:
EEZ60668.1
EDD domain protein, DegV family; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ60669.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.757
EEZ60663.1
Putative [acyl-carrier-protein] S-malonyltransferase; KEGG: stl:stu0386 2.1e-42 fabD; malonyl CoA-ACP transacylase K00645; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.608
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
 
    0.588
fabF
Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
     0.519
EEZ60660.1
FabA-like domain protein; KEGG: sth:STH117 1.9e-25 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372; Psort location: Cytoplasmic, score: 8.87.
 
     0.513
EEZ61786.1
3-oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: art:Arth_2954 9.1e-35 3-oxoacyl-(acyl-carrier-protein) synthase K00646; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.470
fabG
3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.431
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.