STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60671.1Glycerate kinase; KEGG: tde:TDE0208 7.8e-93 glxK; glycerate kinase K00865; Psort location: Cytoplasmic, score: 8.87; Belongs to the glycerate kinase type-1 family. (392 aa)    
Predicted Functional Partners:
EEZ60670.1
GntP family permease; KEGG: eci:UTI89_C3106 5.4e-53 ygbN; hypothetical permease YgbN K03299; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.695
EEZ60672.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.686
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.637
EEZ61685.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: fnu:FN0454 3.9e-169 aldehyde dehydrogenase B K00138; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.632
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.613
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.