STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60686.1Tat pathway signal sequence domain protein; KEGG: lpl:lp_3125 2.2e-19 fumarate reductase, flavoprotein subunit precursor, N-terminally truncated K00238. (642 aa)    
Predicted Functional Partners:
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.855
EEZ61203.1
Tat pathway signal sequence domain protein; KEGG: lpl:lp_0952 1.9e-34 fumarate reductase, flavoprotein subunit precursor K00238; Psort location: Cytoplasmic, score: 8.87.
  
     0.774
EEZ60916.1
Tat pathway signal sequence domain protein; KEGG: mtu:Rv3537 5.2e-48 3-ketosteroid-delta-1-dehydrogenase; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.772
EEZ60775.1
Tat pathway signal sequence domain protein; KEGG: lpl:lp_0952 4.4e-51 fumarate reductase, flavoprotein subunit precursor K00238; Psort location: Cytoplasmic, score: 8.87.
  
     0.770
EEZ61196.1
KEGG: mth:MTH1850 2.9e-31 fumarate reductase iron-sulfur protein K00245; Psort location: Cytoplasmic, score: 9.36; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
   
  0.675
EEZ61495.1
4Fe-4S binding domain protein; KEGG: mma:MM1824 9.8e-06 formylmethanofuran dehydrogenase K00205; Psort location: Cytoplasmic, score: 8.87.
  
 0.656
EEZ60684.1
Hypothetical protein.
       0.645
EEZ60927.1
4Fe-4S binding domain protein; KEGG: mst:Msp_0335 8.4e-05 porD; PorD K00168; Psort location: Cytoplasmic, score: 8.87.
  
 0.558
EEZ60687.1
Transcriptional regulator, LuxR family; Psort location: CytoplasmicMembrane, score: 9.99.
       0.531
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
    
  0.520
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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