STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60707.1Fic family protein; Psort location: Cytoplasmic, score: 8.87. (214 aa)    
Predicted Functional Partners:
EEZ60736.1
Transcriptional regulator, LuxR family; KEGG: eci:UTI89_C3919 5.1e-17 malT; MalT-maltotriose-ATP transcriptional activator K03556; Psort location: Cytoplasmic, score: 8.87.
  
     0.494
EEZ60704.1
Hypothetical protein; KEGG: rso:RSc2990 0.00062 dsbD, RS01128; probable thiol:disulfide interchange transmembrane protein K04084; Psort location: CytoplasmicMembrane, score: 9.99.
       0.485
EEZ60705.1
Lantibiotic protection ABC transporter permease subunit, MutE/EpiE family; Psort location: CytoplasmicMembrane, score: 9.99.
       0.485
mutF-2
KEGG: fal:FRAAL1877 3.0e-43 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.49.
       0.485
EEZ60703.1
Response regulator receiver domain protein; KEGG: rha:RHA1_ro04741 1.2e-32 phoP; response regulator, two-component system K02483; Psort location: Cytoplasmic, score: 9.98.
       0.434
EEZ60702.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC00629 4.4e-29 spaK; subtilin biosynthesis sensor protein SpaK; Psort location: CytoplasmicMembrane, score: 9.49.
       0.415
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.