STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60721.1CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 9.99. (337 aa)    
Predicted Functional Partners:
EEZ60720.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ60722.1
Hypothetical protein.
       0.773
EEZ60723.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEZ60724.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.621
EEZ61227.1
Nitroreductase family protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.486
EEZ61231.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
  
  
 0.475
pdxT
Pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.
  
    0.465
pdxS
Pyridoxal 5'-phosphate synthase, synthase subunit Pdx1; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.
       0.464
EEZ61232.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.461
EEZ61313.1
LPXTG-motif cell wall anchor domain protein; KEGG: chu:CHU_2852 0.00017 CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein K01238; Psort location: Cellwall, score: 9.17.
  
     0.453
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.