STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60724.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (221 aa)    
Predicted Functional Partners:
cobA
KEGG: mta:Moth_1248 3.1e-114 uroporphyrin-III C-methyltransferase K02302:K01719; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.759
EEZ60721.1
CAAX amino terminal protease family protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.621
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.611
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.537
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.464
EEZ60720.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.461
EEZ60722.1
Hypothetical protein.
       0.461
EEZ60723.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.87.
       0.461
EEZ60552.1
Addiction module toxin, RelE/StbE family; Psort location: Cytoplasmic, score: 8.87.
  
     0.454
EEZ60543.1
Hypothetical protein.
  
     0.431
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.