STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60753.1KEGG: cte:CT1537 4.8e-61 nifK; nitrogenase molybdenum-iron protein, beta subunit K02591; Psort location: Cytoplasmic, score: 8.87. (519 aa)    
Predicted Functional Partners:
EEZ60752.1
KEGG: pca:Pcar_2098 6.4e-82 nitrogenase iron protein K02588; Psort location: Cytoplasmic, score: 8.87; Belongs to the NifH/BchL/ChlL family.
 
 0.992
nifD
Nitrogenase molybdenum-iron protein alpha chain; KEGG: mac:MA3898 1.2e-50 nifD; nitrogenase, subunit alpha K02586; Psort location: Cytoplasmic, score: 8.87; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.982
EEZ60468.1
Glutamine synthetase, beta-grasp domain protein; KEGG: deh:cbdb_A1050 6.5e-128 glnA; glutamine synthetase, type I K01915; Psort location: Cytoplasmic, score: 9.98.
   
 
 0.665
EEZ62164.1
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: lsl:LSL_1297 1.2e-165 gdhA; NADP-specific glutamate dehydrogenase K00262; Psort location: Cytoplasmic, score: 9.98; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.618
EEZ61124.1
Rubrerythrin; KEGG: cpr:CPR_0938 4.6e-20 periplasmic [Fe] hydrogenase 1 K00532; Psort location: Cytoplasmic, score: 8.87.
     
 0.593
EEZ62230.1
TOBE domain protein; KEGG: mxa:MXAN_6643 5.5e-07 modC; molybdate ABC transporter, ATP-binding protein K06022.
  
   
 0.570
EEZ60755.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.511
EEZ60756.1
Periplasmic binding protein.
       0.467
nifJ
KEGG: ctc:CTC01741 0. pyruvate-flavodoxin oxidoreductase K03737.
      
 0.459
EEZ60751.1
Hypothetical protein.
       0.440
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.