STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60771.1KEGG: bur:Bcep18194_A3518 5.1e-41 ABC transporter, ATPase subunit K01990; Psort location: CytoplasmicMembrane, score: 9.49. (309 aa)    
Predicted Functional Partners:
EEZ60772.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
  0.945
EEZ60773.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.87.
 
     0.833
EEZ61345.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.732
EEZ61596.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_B1759 1.7e-49 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit K02049; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 
0.615
EEZ61231.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
 
 
  0.561
EEZ61232.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
  0.544
EEZ60556.1
KEGG: fal:FRAAL1796 3.1e-16 putative ABC transporter ATP-binding subunit; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.536
EEZ62113.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A3402 2.9e-47 ABC efflux pump, ATPase subunit K06020; Psort location: CytoplasmicMembrane, score: 9.49.
 
  
 
0.529
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.450
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.448
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.