STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60790.1ABC transporter, ATP-binding protein; KEGG: rru:Rru_A2339 2.0e-78 ABC transporter component K06021; Psort location: CytoplasmicMembrane, score: 10.00. (581 aa)    
Predicted Functional Partners:
EEZ60791.1
Prevent-host-death family protein; KEGG: rru:Rru_A0864 6.3e-75 ABC transporter, transmembrane region K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.821
EEZ61781.1
Phosphopantetheine attachment domain protein; KEGG: rha:RHA1_ro00144 1.1e-05 non-ribosomal peptide synthetase K01779:K03367; Psort location: Cytoplasmic, score: 8.87.
  
 0.672
EEZ61785.1
AMP-binding enzyme; KEGG: rpb:RPB_0580 6.6e-15 AMP-dependent synthetase and ligase K01897; Psort location: Cytoplasmic, score: 8.87.
  
 0.666
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
  
 0.655
EEZ60788.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
       0.642
EEZ60789.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.642
EEZ60792.1
KEGG: bpm:BURPS1710b_A2293 0.00031 TetR-family regulatory protein K00356; Psort location: Cytoplasmic, score: 8.87.
 
     0.546
EEZ60784.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bce:BC4666 3.7e-31 two component system histidine kinase; Psort location: CytoplasmicMembrane, score: 7.84.
       0.491
EEZ60785.1
Response regulator receiver domain protein; KEGG: ava:Ava_3369 3.1e-41 two component transcriptional regulator, winged helix family; Psort location: Cytoplasmic, score: 9.98.
       0.491
EEZ60786.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.491
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.