STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60804.1Transcriptional regulator, LysR family; Psort location: Cytoplasmic, score: 8.87; Belongs to the LysR transcriptional regulatory family. (320 aa)    
Predicted Functional Partners:
EEZ60919.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 7.0e-07 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 8.87; Belongs to the LysR transcriptional regulatory family.
  
     0.613
EEZ60917.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.580
EEZ60805.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.572
EEZ60806.1
B3/4 domain protein; Psort location: Cytoplasmic, score: 8.87.
       0.466
EEZ60704.1
Hypothetical protein; KEGG: rso:RSc2990 0.00062 dsbD, RS01128; probable thiol:disulfide interchange transmembrane protein K04084; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.465
EEZ60803.1
Tat pathway signal sequence domain protein; KEGG: lpl:lp_3125 3.0e-24 fumarate reductase, flavoprotein subunit precursor, N-terminally truncated K00238; Psort location: Cytoplasmic, score: 8.87.
       0.442
EEZ61780.1
AMP-binding enzyme; KEGG: bpm:BURPS1710b_A2151 9.8e-81 pchF; pyochelin synthetase K01932; Psort location: Cytoplasmic, score: 9.98.
     
 0.427
EEZ60858.1
Tat pathway signal sequence domain protein; KEGG: cno:NT01CX_0026 9.2e-48 2,4-dienoyl-CoA reductase, putative; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.420
EEZ60705.1
Lantibiotic protection ABC transporter permease subunit, MutE/EpiE family; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.416
EEZ60738.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 0.00057 putative protein-glutamate methylesterase; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.412
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.