STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEZ60810.1Putative TIGR00659 family protein; KEGG: bcz:BCZK3376 4.8e-29 murein hydrolase export regulator K01238; Psort location: CytoplasmicMembrane, score: 9.97. (234 aa)    
Predicted Functional Partners:
EEZ60809.1
LrgA family protein; KEGG: btk:BT9727_3424 7.5e-08 murein hydrolase exporter K06518; Psort location: CytoplasmicMembrane, score: 9.97.
 
  
 0.987
EEZ61068.1
Response regulator receiver domain protein; KEGG: rru:Rru_A0376 1.2e-30 transcriptional regulator, LytR/AlgR family K07705; Psort location: Cytoplasmic, score: 9.98.
    
 0.659
EEZ60811.1
Hypothetical protein.
       0.655
EEZ60808.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.574
EEZ60807.1
Hypothetical protein.
       0.433
Your Current Organism:
Slackia exigua
NCBI taxonomy Id: 649764
Other names: S. exigua ATCC 700122, Slackia exigua ATCC 700122, Slackia exigua str. ATCC 700122, Slackia exigua strain ATCC 700122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.